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FSHW | 生命早期婴儿肠道双歧杆菌的发育轨迹和时间动态呈现复杂性
2023-09-14作者:来源:责任编辑:食品界 字体A+AA-
高旭,男,农学硕士,毕业于内蒙古农业大学食品科学与工程学院,主要研究方向为益生乳酸菌及肠道微生物。目前已参与发表文章7篇,其中SCI收录4篇,申请国家发明专利5项。参与国家重大专项1项,内蒙古自治区重大专项1项,地方科技项目3项。
孙志宏,男,汉族,内蒙古农业大学乳品生物技术与工程教育部重点实验室研究员,博士研究生导师,国家优秀青年科学基金获得者。一直从事乳酸菌生物多样性、基因组学和肠道微生物等方面的基础研究,主持承担国家自然科学基金项目、863项目、内蒙古自治区自然科学基金项目,入选内蒙古自治区“草原英才”工程、内蒙古自治区“321人才工程”。期间发表学术论文128篇,其中第一作者和通讯作者发表学术论文55篇;授权发明专利12项,参编学术专著2 部,参与起草5项质量安全地方标准。获教育部技术发明一等奖、内蒙古自治区科学技术进步一等奖、教育部科学技术进步二等奖、内蒙古自治区自然科学二等奖等科技奖励,荣获内蒙古青年创新人才奖、内蒙古优秀科技工作者称号、内蒙古自治区优秀博士学位。
SMRT sequencing and ddPCR reveal the complexity of developmental trajectories and temporal dynamics of gut bifidobacterial communities in infants
Xu Gao1, Tao Zhang1, Xiaoye Bai, Qiannan Wen, Dongyu Li, Lai-Yu Kwok, Heping Zhang, Zhihong Sun*
Key Laboratory of Dairy Biotechnology and Engineering, Ministry of Education; Key Laboratory of Dairy Products Processing, Ministry of Agriculture and Rural Affairs; Inner Mongolia Key Laboratory of Dairy Biotechnology and Engineering, Inner Mongolia Agricultural University, Hohhot 010018, China
1 Both authors contributed equally.
*Corresponding author.
Infant intestinal microbiome is closely linked with health and risk of disease. Bifidobacterium are important components of the infant gut and are known to confer various health effects on the host. However, few studies have described the precise composition and dynamics of early infant gut bifidobacterial communities. Thus, this was a pilot study aiming to describe the developmental trajectories and temporal dynamics of bifidobacterial communities in infants before 6 months of age. A total of 28 fecal samples from 4 infants (GF, ZZ, QM, TN, respectively) were collected and analyzed after 5, 15, 30, 60, 90, 120, 150, and 180 days of birth by a bifidobacteria-target method (based on single-molecule real-time sequencing of partial bifidobacterial rpsK genes) in conjunction with droplet digital polymerase chain reaction (ddPCR). The infant fecal microbiota comprised a total of 11 bifidobacterial species, including 4 major species, i.e., B. dentium (37.35 %), B. catenulatum (32.04 %), B. breve (22.24 %), and B. animalis (8.02 %). The infant microbiota showed highly individualized developmental trajectories. The leading species for GF was B. catenulatum, with a relatively stable developmental trajectory. In ZZ, B. breve was enriched, and the developmental trajectory was rather fluctuating. The most abundant species for QM and TN was B. dentium. The developmental trajectory of B. dentium in QM showed a trend of gradual decrease, whereas an opposite trend was seen in samples of TN. The results of ddPCR confirmed large variations in quantities of bifidobacteria between infants and suggested discordances in temporal dynamics of bifidobacterial communities during the first half year of infancy. In conclusion, our results suggested that the early infant gut bifidobacterial microbiota was highly complex and temporal dynamics, with individualized developmental trajectories, which should be considered in future research of infant gut microbiota.